Analysis

Analytical Report
A02677B5_DAPI_Demo_Realign
Alerts
Metrics
Value
Alert
Note

- Summary
  Gene Protein
- Square Bin
  Gene Protein
- Cell Bin
  Gene Protein
- Image
- Analysis

- Bin 20
- Bin 50

Multiomics Clustering
(left) Multiomics (Transcriptomics and Proteomics) Spatial clustering by Leiden algorithm in bin20
(right) UMAP projection of RNA and Protein (bin20)
Tissue Plot with Spots (bin20)
UMAP Projection of Spots (bin20)
Top Markers by Cluster
(top) Top <=3 marker genes per leiden cluster
(bottom) Top <=3 marker proteins per leiden cluster
Gene:Protein Correlations
Spearman correlation (in bin20) between raw gene counts and raw antibody counts under tissue, in which antibody has at least one marker gene in the protein panel.
Multiomics Clustering
(left) Multiomics (Transcriptomics and Proteomics) Spatial clustering by Leiden algorithm in bin50
(right) UMAP projection of RNA and Protein (bin50)
Tissue Plot with Spots (bin50)
UMAP Projection of Spots (bin50)
Top Markers by Cluster
(top) Top <=3 marker genes per leiden cluster
(bottom) Top <=3 marker proteins per leiden cluster
Gene:Protein Correlations
Spearman correlation (in bin50) between raw gene counts and raw antibody counts under tissue, in which antibody has at least one marker gene in the protein panel.